Basketball is all about matchups right?
Let's take the Magic team vs the Jordan team. Off the bat we can see it's a game of size and length vs speed and quickness. On the defensive end, the most obvious match up is Jordan on Magic. It's also a match up that we have seen before. Magic can score, but he's not a go-to scorer and would do more facilitating for the hypothetical team. Jordan's job would simply be to play good one on one defense and corral him for Wade and Iverson to play the passing lanes. Easier said than done.
Wade on the other hand will play Durant one on one with Iverson or Jordsn occasionally offering help defense and double teams. Durant will get his points regardless of who is guarding him, but you can limit his touches and frustrate him. What you would do is force Pippen into being the primary scorer. Those are the odds the Jordan-led team could live with as Pippen is not a dominant scorer. They have the foot speed where they would still be able to challenge a shot put up on rotation.
I said earlier, you are looking at an all time great defensive front court in Robinson and Hakeem. We are talking about two of the greatest shot blockers in the history of the game. Wilt and AD will be limited in what they can do. They will still get boards and points but not in a dominant fashion. All in all those are tough assignments for team Jordan, but they would still be able to hold their own.
Where I see them having the advantage is on the other end. Let's start at the front court. Anthony Davis is a pup and would not be able to handle a prime Hakeem and his myriad of post moves. He would treat the boy. If you bring help with Wilt, we have seen David Robinson put up 71 points before (in an era of dominant big men)

. You bring Magic to help, then Jordan goes off for 50. Like Durant, you are not going to stop a prime Wade from scoring buckets. KD has the length, but a prime Wade is getting to the bucket at will, particularly when you have to contend with two of the other quickest players to ever play the game in MJ and Iverson. The speed advantage they would have would be problematic for the wing players of the other team. So much slashing their opponents would feel like they were in a Robert Rodriguez movie

. I could see the Magic team taking them to 6 games, but that's about it.
Let's not even get started on that LeBron James team. 4 of those players live in the paint and the other is a slasher. They would get in each other's way. And we are talking about 5 players that have the potential to be hot heads. That team would have the WOAT chemistry. The team that would give the Jordan team problems is the Kobe team with all that perimeter shooting and high IQ basketball, but I'm still giving the Jordan team the advantage due to dominant scoring.
All in my humble opinion of course.